- Mutation Dataset
Dataset of somatic mutations in cancer used for the TUSON Explorer predictions in the paper.
The dataset contains the list of somatic mutations in tumors and the corresponding tumor type and tumor samples where they were found.
The TCGA (The Cancer Genome Atlas) samples are identified with the tumor sample IDs.
- SCNA Dataset
The SCNA (Somatic Copy Number Alteration) data was derived from the following dataset from the TCGA Genome Data Analysis Center at the Broad Institute: analyses__2013_05_23.
The following tumor types were considered for the analysis presented in the paper: BLCA, BRCA, COADREAD, GBM, HNSC, KIRC, LUAD, LUSC, OV, STAD, SKCM, THCA, UCEC and KICH.
- Tumor samples for Lasso prediction
List of tumor samples used for the Lasso prediction of TSG and OG.
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